Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015907678.1_cds_XP_016457778.1_51468
CDS Infomation

[gene=LOC107781566] [db_xref=GeneID:107781566] [protein=pentatricopeptide repeat-containing protein At4g21065-like] [protein_id=XP_016457778.1] [location=5954..7873] [gbkey=CDS]
Sequence

ATGCTGCAGTCTGTTTGTTTGGCATCTTCACTTCCCAACCATACCGTTCTCTCCCCAAAA
CTCAAACGCTCCTTTGATGCCAAAAACAATGTGCAAACACCCACTTCAGAAACCCCCTAC
ACTAGCCTTGCCTACAATTTCAACTCCCCATTTGAGCTCAAACAAGTTGTTGCCTTTCTC
ATTAAAACCAATAAACCTCTCTCATTACTCCCACTTTCTCGTGTTGCCTCCGTTTGTGCA
CTTACTCCCAACTTCTCATTCGCTCAACAGATTTTTTACTGTATTGAGCAGCCAGAAGTT
TCTGTGTGGAATAGCTGCTTGAGAAATCTTGCTGAAGGCAATTCTGTTATTGATGCCATT
TTCTTGTTTCATCAAATGCGCATTTACAATGTTGTACCTGATATTTTCACTTGCTCTTTT
GTTCTCAAGGCTTGTTTGAAATTACTGGATCTTTCATGTGGGAAAATTGTCCATGCTTAT
ATTGAGAAACTTGGGTCTCAGTCGAATTTAGTATTGCTAAACGCACTTCTTCACTTGTAT
GCTAGTTGTGGAGCAATGGCTGATTCCATGCTTCTGTTTGATAAAATGCCTCAACGAGAT
GTTGTGTCTTGGAATATAATGATTACACAATTAGCGAAGAAGGGTAATATTAATGGGGCG
TTTGAATTGTTTTCCCGAATGCCCGAGAGAAATTTAAGGTCTTGGACTGCCATGATTACG
GGTTTTGTTCATTGCGGGAAGGCTAAAGAGGCTATTAGACTTTTCACAGAAATGGAAGAG
ACTGGCTTGAGGGCGAATGAGGTGACTGTAGTGGCTGTTCTTGCAGCTTGTGCTGATTTG
GGTGCACTTCAATTGGGCAGGAGGATTCATGAGTATTCAAATAAGAGCGGGTTTAAAAGA
AATATTCACGTTTGTAACACTCTGATTGACATGTACATTAAGTGTGGGTGCTTAGAGGCT
GCAAAAGCTGTTTTTGAAGAAATGAAGGAACGGACAATTGTATCGTGGTCTGCTATGATC
CAGGGTTTAGCTATGCATGGACAGGCTGATGAAGCCTTAGAACTCTTTAACAAGATGATC
AAAACGGGAATGAAGCCTAATGAGGTCACATTTCTTGGAATCTTGCATGCTTGTAGCCAT
ATGGGGTTGGTCAATGAGGGGCGAGAATTTTTCGGTAGTATGACTAGAGGCTATAACATT
ACTCCCCAAATTGAGCATTATGGTTGCATGGTTGATCTCTTGAGTCGCGCAGGACTTCTT
AAAGAGGCATATGAGTTCATCGCAAGCATGCCTATAAAGCCAAATGGTGTCATATGGGGT
TCTTTTCTAGGTGGATGTAGAATTCAAAAGGATGTGGACATGGCCGAGGAAGCTATGAGG
CACCTAGGTATATTGGACCCTCTTAATGACGGATACTATATAATTATGTCAAATATTTAT
GCAGAAGCTAAGCGCTGGGAAGATGCAGCAAGGGTGAGGAAGTTGATGAAAGATCGAGGA
GTAAAGAAAACTCCAGGTTGGAGTTCAATAACTATAGCAGGAGTAATGCATGAATTTGTG
GCCGGAGATGACAACCATCCTCAGGCAGAGGAGATCTTTGAAAGATGGGACAAACTGCTA
GAACAGATGAGGTTCAAAGGATATGTACCAAATACTTCAGTGGTTCTACTAGACATGGAA
GAGAATGAGAAAGAAAAATATTTGTATCGCCATAGTGAGAAATTGGCCCTTGTTTTTGGT
TTGATGAACACCAAACCAGGAGAAACAATAAGGATAATGAAGAATCTTCGCGTTTGTGAA
GACTGCCATGCTGCTTTCAAAGTAATATCAGAAATTGTCAAGCGAGAGATAGTTGTGCGT
GATAGGAATAGATTTCATTGTTTTAAAGGTGGTCTTTGTTCTTGTAAGGACTATTGGTAG

Peptide Sequence

PEP ID

XP_016457778.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein At4g21065-like [Nicotiana tabacum]
Sequence

MLQSVCLASSLPNHTVLSPKLKRSFDAKNNVQTPTSETPYTSLAYNFNSPFELKQVVAFL
IKTNKPLSLLPLSRVASVCALTPNFSFAQQIFYCIEQPEVSVWNSCLRNLAEGNSVIDAI
FLFHQMRIYNVVPDIFTCSFVLKACLKLLDLSCGKIVHAYIEKLGSQSNLVLLNALLHLY
ASCGAMADSMLLFDKMPQRDVVSWNIMITQLAKKGNINGAFELFSRMPERNLRSWTAMIT
GFVHCGKAKEAIRLFTEMEETGLRANEVTVVAVLAACADLGALQLGRRIHEYSNKSGFKR
NIHVCNTLIDMYIKCGCLEAAKAVFEEMKERTIVSWSAMIQGLAMHGQADEALELFNKMI
KTGMKPNEVTFLGILHACSHMGLVNEGREFFGSMTRGYNITPQIEHYGCMVDLLSRAGLL
KEAYEFIASMPIKPNGVIWGSFLGGCRIQKDVDMAEEAMRHLGILDPLNDGYYIIMSNIY
AEAKRWEDAARVRKLMKDRGVKKTPGWSSITIAGVMHEFVAGDDNHPQAEEIFERWDKLL
EQMRFKGYVPNTSVVLLDMEENEKEKYLYRHSEKLALVFGLMNTKPGETIRIMKNLRVCE
DCHAAFKVISEIVKREIVVRDRNRFHCFKGGLCSCKDYW

Transcript Sequence

Gene sequence data has not been registered.